rs32966551 SNP Detail

Summary

• ID
  rs32966551
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:155832094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTCTTTTT TTTTTTTTTT TTTTGGTTTT TCGAGACAGG
  GTTTCTCTGT GTAGCTCTGG CTGTCCTGGA ACTCACTCTG TAGACCAGGC TGGCCTCGAA
  Y
  TCAGAAATCT GCCTGCTTCT GCCTCCCAAG TGCTGGGATT AAAGGCATGT GCCACCACGC
  CCAGCTCAGA AGGGCCTCTT ATGCCTCCTC AGGTAAACC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45719343	mCV22758147	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
ss148115224	ENSMUSSNP4266312	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32966551					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155832094 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Atad3a	ATPase family, AAA domain containing 3A			Intron
				Noncoding-Transcript-Variant
Rr606559	regulatory region 606559			1768 bp proximal
Rr606560	regulatory region 606560			1889 bp proximal