rs32964679 SNP Detail

Summary

• ID
  rs32964679
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153078980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGAATTTAA GTCTTTTCCA TCTGATGATC ATTCTCTAAG
  GGATTGTACT GCATTTATTT CATTTCCATA ACCTAACATC TAGATTAGGA ATCTCAACTT
  Y
  CTTTTAGATG AGTAAACTAC TAATTAAACT TGAGTTGATT CTCAGGGGGT TAACTCATAT
  ACCCAGAAGT TCTAGTTTAA ACTGGGTTCT TCATCATCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45218868	mCV23160512	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147988367	ENSMUSSNP1205511	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32964679					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153078980 () rs orientation: forward

Symbol	Name	Function Class
Plagl2	pleiomorphic adenoma gene-like 2	Intron
Rr567587	regulatory region 567587	1402 bp proximal
Rr567588	regulatory region 567588	1896 bp proximal
Tssr26894	transcription start site region 26894	857 bp downstream