rs32963327 SNP Detail

Summary

• ID
  rs32963327
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93034885 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCAGTGGT GGGCTGAGTG
  TCTTCAGGCC AAGGCCTACT GGATGCCCCG GAAGAGGCAC ATGGCAAAGA CCATGAGGAA
  GAGCTGCAGA GAAAGGGAGA AGATGATCTG GAGTCAGACT GGGTGCACGT CGAGGGGCTG
  CCCAGCACAC CTCCTGAGGG GAATCGTGAT TGTGACACTA CCCGGGGCAA GCATCTGCTC
  R
  CCACTTGGGT AAAAAACAGG CGTTGGAAAG CAAGTCATCT GTTTAAACAG CTCAAATCTG
  TCTTTTTTGG GTTGGCAGAG ACTTTAAGCA AAGCACAACC CTTCTTGGGC ACCTGAGTGT
  GTACCGAGAG CTTACCATGT AAAGTAGGTT TCCAATGCTG TTAGCAGCAG CCTTTCTAAC
  CAGCAGGAAG TGAGGCATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45218503	mCV23016577	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146939832	ENSMUSSNP4150318	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32963327					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93034885 () rs orientation: forward

Symbol	Name	Function Class
Rr561120	regulatory region 561120	152 bp distal
Rr561121	regulatory region 561121	589 bp distal
Tspan18	tetraspanin 18	Intron
Tssr25280	transcription start site region 25280	1223 bp upstream
Tssr25281	transcription start site region 25281	1207 bp upstream
Tssr25282	transcription start site region 25282	1137 bp upstream
Tssr25283	transcription start site region 25283	1084 bp upstream
Tssr25284	transcription start site region 25284	867 bp upstream