rs32962336 SNP Detail

Summary

• ID
  rs32962336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:131860102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGAAGGAG ATTAACCTTA
  GTCACCTGTG GGAGCAATAT CTGAAGAACA ACCCCAAGGG CCTCTCAGGT GGCTCAGAGG
  GCAAAGGTGA CTGGCACCCA ACAACGCAAG CCTGATAACC TGAGCTTGGT TCTTGGAACC
  CAGGTAAAGG TGGAAAGAGA GAACTGATTC TACCGAGTTG TCCTCTCACT CAGGCTGTGG
  R
  ATGTGCCATC CCCCACGTAG CCAAACTGAA TGAAGTATTA CTGAGGAACA CGGAGACCGT
  CCTCTTCCCT GGGAAGACGT CAGTCTCCTG GGGAGTGCAG CAACAGCTTT ACTGGAGGGT
  TTCCAACCTG GAGACCCTTG TACCAATATC AGATGTACCT ACCCATAGCT ACAGAAGTCC
  CCTCCCCCAG AATGGTAGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45718547	mCV22587202	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147473527	ENSMUSSNP5317546	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss321330923	CHEV_4_131688706	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32962336					SNP	G	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131860102 () rs orientation: forward

Symbol	Name	Function Class
Oprd1	opioid receptor, delta 1	Intron
Rr600881	regulatory region 600881	within coordinates
Rr600882	regulatory region 600882	1451 bp proximal