rs32960475 SNP Detail

Summary

• ID
  rs32960475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152545702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGGGTT GTCAGAACAT
  GCCTCACCTC GTGTACCCCT GGTCTCGCTG GCAAGGGTCT CAAATTTATA CTTACATTCT
  CAGTTTCCAT CTACGGAAGG CAAGTAACAC TGGGTTTGCT ATAGGGATCG CAAGTTTTGT
  TTCAGAATAG TTTGTAAAAA CTAACTTTGA CAAGCTTTGC AGGGTGTTGC AGGCCTTTAT
  Y
  CCCAGTACTT TGGAGACAGA GGTAGAAAGA GCTCTGTGGG TTCAAGTCCA GCCTGGTCTA
  CATCGTGAAT TCTAGGTCAG CCAGGGCTAC ACCTTTCTCA AAACAAATAC ACAAACAATG
  AAAGTGACCT TGAATAAAGG GACTCTGAAA ACCAAGAAGT GGGACCCAGG ATTCAAACTC
  ACATTGCGAG TTACCAGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45718225	mCV23464595	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss148082676	ENSMUSSNP7177395	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs32960475					SNP	C	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152545702 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2			Intron
				Noncoding-Transcript-Variant
Rr605885	regulatory region 605885			1996 bp proximal