rs32955277 SNP Detail

Summary

• ID
  rs32955277
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150352266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTCAGTG GGTAAAACTG
  CTTATCATGC AATCTGGAAC AGTGAAAAGC TGGTTGAGGC TGGATATGGT GGTGCATGCC
  TTTAGTCCTG ACGCCAGAGG AAGACCGAAC TCTGTGAGTT TCAGGCCGGA CTGATCTACA
  TAAGGAGACT CTGTTTCAGC AAAATAAAAT AAAACAAAAC CTCTCGGGGA AAAAAACAAA
  M
  AAGAACAACA ACAACAACCA CAACCAAAAA AAACAAAACA AAACAAAACC CTCAAACCAA
  AATATAGATT CCAAGGCTAG GCACGCAGCG CAGTGGGAGA ATGTGCGCCC CCTCCCCATT
  ACCTCCACCC CCACCCCCAT GCACACAGCA CAGTGATAAG ATGCTTGATC CCCATGAATG
  AAATCCTGGC TTCAACTTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45717806	mCV24224106	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss148051558	ENSMUSSNP2418417	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs32955277					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150352266 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15349	CpG island 15349	1149 bp proximal
Rr377418	regulatory region 377418	415 bp upstream
Rr605259	regulatory region 605259	586 bp distal
Rr605260	regulatory region 605260	921 bp proximal
Rr605261	regulatory region 605261	1342 bp proximal