rs32949527 SNP Detail

Summary

• ID
  rs32949527
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACACCTGA TAGTACTGGC
  TCACTCGTGT TTCTAATGTT ACCTGGTCAG GGAGGGGGTG CTTGCTTTAT TCCTGGTGGA
  CAGCTACCTC TGTCTGCCCC GTGTCTGCCA TTCTGTCATC ACAGGGGATC TTGGTGGATG
  CTAGTCTCTG GCCAGCCTTG AGTCTTTGGC TCTTTGCTTG GAGATCAGTA TCGCTGGAGA
  K
  CTCAGCCGCA CAGCACAGAG ATGGTGGAGC CCTTTATGTC CAAAGACTCT AAAGGAGAAC
  CTCACCAGCT TTGGGCGGCT CTTGGCATGC CCTGGCTTGA AACCACATCT CCACTTCTTG
  CATCATCTGC CTTTGTGGTA ACACTGCCCC CTCTTGGTGT TTGCCTCTCT TTTACCTGGG
  CACTTGTGAT GGTAATAAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45216843	mCV23078900	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss147960933	ENSMUSSNP1249998	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
ss320561846	CHEV_2_151849999	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32949527					SNP	G	T	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866183 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567262	regulatory region 567262	1850 bp distal
Rr567263	regulatory region 567263	141 bp proximal
Rr567264	regulatory region 567264	338 bp proximal