rs32947408 SNP Detail

Summary

• ID
  rs32947408
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119493364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCCC GCTACTTTTC CTGTCCGACA
  Y
  CAAACTAGGT GTACAGTAAA CAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45216814	mCV22555114	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss320476608	CHEV_2_119488619	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32947408					SNP	C	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119493364 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12124	CpG island 12124	within coordinates
Ndufaf1	NADH:ubiquinone oxidoreductase complex assembly factor 1	62 bp upstream
Rr397235	regulatory region 397235	within coordinates
Rr563557	regulatory region 563557	96 bp distal
Rr563558	regulatory region 563558	within coordinates
Tssr25825	transcription start site region 25825	48 bp upstream