rs32947068 SNP Detail

Summary

• ID
  rs32947068
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89419214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTGTCTGG CCCGCATCTC
  AGCAGCGCAC TGGATCTGGG GCCTTGGTCC TGGGTGTGCT CTTGGGTGTA TGAGGGATGT
  CGGGGCTTCC TTCCTCGTGC GGCAGTGGTT ACATGAGGCT GAGGTTGTAA GGGCAACAGG
  GCAGGAGATG CTGAGGCAGG GGTAGGGGTG GGACTGCTGC TATACGTCCA AGTAAAACCA
  M
  GATCAAGGTC AGGGGAAGAG GGCTTGCCAA AGAGACCTGG GCACCCAGCT TGTCCTAAGA
  TGTGTGGGTT TTATGAACTT CCCTCCCAGC TTATTTTTCT TTCAAGTAAG TGTGGGCCTG
  AGGCAGCTCT GTGTTCCTGT CCAGCCTTCC CACTCAAAGG CACTGTGCTG TCCTCATAGA
  GCATCGGGGC TCACACCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46751147	NES10748039	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32947068					SNP	A	A	A	A	A	A	C	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46751147	NES10748039	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89419214 () rs orientation: forward

Symbol	Name	Function Class
Rr580122	regulatory region 580122	1129 bp distal
Rr580123	regulatory region 580123	38 bp distal
Rr580124	regulatory region 580124	727 bp distal
Rr580125	regulatory region 580125	419 bp proximal
Rr580126	regulatory region 580126	508 bp proximal