rs32946929 SNP Detail

Summary

• ID
  rs32946929
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141976737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAAGCGT GGTCTGTGCA
  CCATGCAGTC TCCCATTCAC CATAATTACT CCAGCGGAGG CACAGAGGCA TGGAAGGATG
  TGCCCAGGAT CACATAGCTT CTAAACCGAG ACCAGTGCTT TAGCTAAGTG CATCTTCAGT
  CACTCACTGA CCCAAAAGCA AGTGCCACTC CATAGCCAGG CCCTGTCCTA GGCCGTGGAG
  S
  TGCGTCACTG TGAGACTCTG CCCCCTCCCT CTCCCCAGGA TACTCAGTAT AGAAAGTCAA
  AATGCTTAAA GCTTCGCAGG AGCCAACCTA TGATCTCAGA GACCTTCCTG AGGTTGGAGG
  TGAGCCTGCC GTTTTAACAG TGGCCACTGG AGGCAGCAAA GAGTCAAACA CAGCCAGTGC
  CCTGGAGAGG TTTTCTGAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45716607	mCV25054563	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss147752370	ENSMUSSNP5243791	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32946929					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141976737 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kazn	kazrin, periplakin interacting protein			Intron
				Noncoding-Transcript-Variant
Rr377318	regulatory region 377318			within coordinates
Rr604044	regulatory region 604044			545 bp distal
Rr604045	regulatory region 604045			within coordinates