rs32939810 SNP Detail

Summary

• ID
  rs32939810
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153269726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTAGGGTG GGGGTTGTTT GTAGAGTTTG GTGGTGGCTT
  TTTGTGCAGT GCTAGGAATG GAACCCAGAG CTTCATGTAT GCTAGGCAAA AACATGAATT
  K
  TAACAATGTA TTGTAAAGTC AGCTGCAGTG GTAGGTACAT CCTATAGCCC CACTATTATA
  AAAGCTGAGG CAGGAGTATC AGCTCTGATT ACGCATAGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45216016	mCV22912934	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147993458	ENSMUSSNP2501059	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32939810					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153269726 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nol4l	nucleolar protein 4-like			Intron
				Noncoding-Transcript-Variant
Rr567636	regulatory region 567636			1204 bp distal
Rr567637	regulatory region 567637			149 bp distal
Rr567638	regulatory region 567638			727 bp proximal