rs32939073 SNP Detail

Summary

• ID
  rs32939073
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152361265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTGCTGAC AGACTGGAAG
  ACGGAATGGT AGGAGGGAAT TGCCTCTCAG CCTGCTGGTA GAGTATGGTG CCTCCTCTAA
  CCTTAAACCT CCTGCTCAGC ATCCAATGCC CTTTATCCCA TCCGAAGGCA CCTGGCAGTT
  CCTCTACAGC CAAGGCCTGG GCTCTTGGGT GTCTCCAGGC CAACACTAGT CCATAGGACC
  S
  GCTGGGTGCG AGCCAGGCAG GCCCAAGTGC TGGCTGCTAC CTCACAGCAC CTACTGTGTG
  TGGGACCTAG CTCCCAACAT GCTGCTGTCC CAGCACAGCA CACACTATGT GATACCTGGG
  CCCTAGGCTT TAAATATGTG GTGTCTATCC ACTTAGCTTT CCACAGAAGC AGCAAAGCTC
  TTCTGCAGGT TGGGGCCTTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45716014	mCV23461043	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss148080246	ENSMUSSNP512052	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
ss321434047	CHEV_4_151650917	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32939073					SNP	C	G	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152361265 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15401	CpG island 15401	1691 bp distal
Gpr153	G protein-coupled receptor 153	Intron
Rr605818	regulatory region 605818	1332 bp distal
Rr605819	regulatory region 605819	within coordinates
Rr605820	regulatory region 605820	260 bp distal
Rr605821	regulatory region 605821	1084 bp proximal
Rr605822	regulatory region 605822	1287 bp proximal
Rr605823	regulatory region 605823	1467 bp proximal