rs32937711 SNP Detail

Summary

• ID
  rs32937711
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:89283814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTAACCC TTCTACCTCA
  GTCTCCATAG AATGAAAGTT ATGATGTGCT ACCATGCTTG GCTCTAAAAA AAGGAAGCCT
  GATGATAAAG AATTGGCTTC ACATACAAGG TACACGGCAC CAACAGGTGT TTCTGCATCC
  CAGTACATTT AGGAGATGGA AAAGAGCATT GAAGTCTATG AATGCAGTGT AGTAGCAGAG
  W
  GCTTGTGAGA GCACAAGCTC AACCTCCAGC CCTGGACTAA GGTACCAGAG GAAGAGCTGG
  GCCAGGCAAT GGTGCATGAG GTAGCCAGAG GGGCTGCTCT GAGACTGAAG AGTGGAGACC
  CTTCTAAACA GACTGCAGAC TGCTCCAGCC TCAATTTCTC TAGGGAGTAG GAGGCAAGGA
  CACCTGCTGA GACCCGAGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46749881	NES10734180	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	A	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32937711					SNP	T	T	T	T	T	T	A	T	T	A	A	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749881	NES10734180	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89283814 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi13425	CpG island 13425			1939 bp proximal
Dcst2	DC-STAMP domain containing 2			Intron
				Noncoding-Transcript-Variant
Rr580060	regulatory region 580060			1248 bp proximal
Rr580061	regulatory region 580061			1963 bp proximal
Zbtb7b	zinc finger and BTB domain containing 7B			1139 bp downstream