rs32936750 SNP Detail

Summary

• ID
  rs32936750
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:89293466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCAGCTG CCCTTTACTT
  CTGCCCTTTA CTTCTGGGCT TTCGTTTGGA CTTTTCTTCT TCTTTCTACC CTTTCCTACC
  TTCTGTGGGC CTTGTCTTCC CAGCAGGAGA TTGAACCTTG GTTCCCTTCC TTAGCCCTTA
  TGGGTGTCCC ACCATATGAC CTCTCCACCG TGCCTGTCCC TGGGACTTCT GCTAGGAAGC
  K
  CTGCCACACA GGGTTTCTCT CCTTCTTCCT ATTACTTCTC TCACTGAAGC ATCTCCTGAG
  CCCAACATTT ACCACGCTCT GAACATCCCT CCATGCCTGA GTGGAATAGA GAGGCCAGAG
  GAGCTGAGTC AGGACCAGGG TTTGTTCTGC AAGGCCTGGT CTTATGAAGA GATGGCTGAG
  TTTTGGGTAC CCATACTTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46749956	NES10733827	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32936750					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749956	NES10733827	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89293466 () rs orientation: forward

Symbol	Name	Function Class
Rr580064	regulatory region 580064	191 bp distal
Rr580065	regulatory region 580065	661 bp proximal
Rr580066	regulatory region 580066	1020 bp proximal
Rr580067	regulatory region 580067	1738 bp proximal
Tssr34128	transcription start site region 34128	923 bp downstream
Tssr34129	transcription start site region 34129	973 bp downstream
Tssr34130	transcription start site region 34130	1153 bp downstream
Tssr34131	transcription start site region 34131	1184 bp downstream
Tssr34132	transcription start site region 34132	1721 bp downstream
Zbtb7b	zinc finger and BTB domain containing 7B	Intron