rs32936144 SNP Detail

Summary

• ID
  rs32936144
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148985010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC AACCCCTTCC ACACCCGCCC
  Y
  ACCCGCAGCC CAAGGGCACC TCGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45714772	mCV22999081	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss321423642	CHEV_4_148274662	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32936144					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148985010 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Cpgi15314	CpG island 15314	within coordinates
Rr604790	regulatory region 604790	185 bp proximal
Tssr40309	transcription start site region 40309	575 bp upstream
Tssr40310	transcription start site region 40310	748 bp upstream