rs32935124 SNP Detail

Summary

• ID
  rs32935124
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89207272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTTGCCTT GACTACTCTT
  GGCTGGTTCC AGATGCATAA CCTCTAAACT TCAAAGCCTT TGTAAAACCG GAGGGGGCGC
  TTGCAGAGAC AGTCTGAGAA AAGCGCTTTT TCTTCCCGAT GCTGACGCAT CCGCGCTGAT
  TTCTGCAGCC GCTGAAACTC CTCTGCTACT GTCGCGCAGG ACCACTGGAG AAGTGGCTGC
  Y
  GTTATACCCG CCATTCCCCG TGCTCTCCTT GAAAAAATTA TTATCATTAT TTTTATTATT
  ATTATTTTAG ACTATGGAGA CTTACTATGT TGCCCAGGTG GGCCCTGATC TCCTGGAATT
  AAGCAATCCT CCTGCCTCAG CTTCTAGAGT TCCTGAACTA TAAGTGTGCT TGACAATTCC
  CGTATTCTTT TGGAGTTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46749590	NES10736899	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32935124					SNP	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749590	NES10736899	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89207272 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13418	CpG island 13418	within coordinates
Gm33845	predicted gene, 33845	within coordinates
Gm65883	predicted gene, 65883	within coordinates
Rr580029	regulatory region 580029	within coordinates
Rr580030	regulatory region 580030	746 bp proximal