rs32934934 SNP Detail

Summary

• ID
  rs32934934
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:89288460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

             GCAGCGATGA CACACGGGAT TTCCAGTAGC CGAGCAGCTT GGAGTACAGC
  S
  GGCATATTGG CGCTGCTGGT GGTCAGTGTG GCTGTGTAAG CAAACTCGAG           
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46749923	NES10734021	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	G	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32934934					SNP	C	C	C	C	C	C	G	C	C	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749923	NES10734021	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89288460 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13426	CpG island 13426	1218 bp distal
Rr375330	regulatory region 375330	459 bp upstream
Rr580060	regulatory region 580060	1866 bp distal
Rr580062	regulatory region 580062	837 bp proximal
Tssr34125	transcription start site region 34125	1776 bp downstream
Tssr34126	transcription start site region 34126	1794 bp downstream
Tssr34127	transcription start site region 34127	1829 bp downstream
Zbtb7b	zinc finger and BTB domain containing 7B	Coding-Synonymous