rs32934261 SNP Detail

Summary

• ID
  rs32934261
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89207042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGAAGAC CAAGGCAGCT
  CTAGTTTGCA GCACAGAGTC CTAGACAGGA GTTGTACAGA GAAGGGACTT TGGAAACTGG
  TACAGCGTCC CTCAGGTCTT CAGCTTCGGA TGAGTAACAC AGCCTGCGGG GAAGCCAGTC
  TCGTTTGCTA AGAACTGTGG GAGAACGAAA GCAGAGCTCT CACCAGGGCC ACCAATCCCT
  M
  GTCATCCCAC AAGCCACCGC GGAAAGGCAG TCTTGCCTTG ACTACTCTTG GCTGGTTCCA
  GATGCATAAC CTCTAAACTT CAAAGCCTTT GTAAAACCGG AGGGGGCGCT TGCAGAGACA
  GTCTGAGAAA AGCGCTTTTT CTTCCCGATG CTGACGCATC CGCGCTGATT TCTGCAGCCG
  CTGAAACTCC TCTGCTACTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46749584	NES10736895	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32934261					SNP	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749584	NES10736895	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89207042 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13418	CpG island 13418	within coordinates
Gm33845	predicted gene, 33845	within coordinates
Gm65883	predicted gene, 65883	within coordinates
Rr580029	regulatory region 580029	within coordinates
Rr580030	regulatory region 580030	976 bp proximal