rs32933866 SNP Detail

Summary

• ID
  rs32933866
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89160800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCGGGAAAG AAAAGCAGAG GGGGCCTCCA GGGCAAGAGG
  CAGAGGTCAG GGGAACTTAG GGGAACTGGA GAGCAAAAAT ACTGACCCAG GCTCAGCAGA
  R
  AAGGGCTGTA TTCTCTGTGT CTAGGTAAAC TGCCCTGAGC ACTGCCCTCA AGCACTTTGA
  AAGGATTTCT GGGGCTTGGG TGTGTGCATC CACCTGTGTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46749278	NES10738797	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32933866					SNP	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749278	NES10738797	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89160800 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13414	CpG island 13414	1821 bp distal
Rr367466	regulatory region 367466	1897 bp downstream
Rr580002	regulatory region 580002	1358 bp distal
Rr580006	regulatory region 580006	484 bp proximal
Rr580007	regulatory region 580007	1496 bp proximal
Rr580008	regulatory region 580008	1550 bp proximal
Rr580009	regulatory region 580009	1937 bp proximal