rs32932531 SNP Detail

Summary

• ID
  rs32932531
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:89159856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGGCAGCCA CACCCAGCTA GGCTCTTCAG CGCTCTTCAG
  GCTCTTCAGG CCCGTGCCAG GTGGGAATCC TGGGCCCCAC AGGTCTCAGC AGTTCCTTCC
  Y
  GGGATTCAGA TCCTTTGCCA ACTGGAGAGA GGTCCAGGTC CCTAGATCTA TAGAGGTTCC
  AGCGACACTC AGAAAAAAAA ACAGGCATGC GTCTATTTAA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46749263	NES10738869	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32932531					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46749263	NES10738869	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:89159856 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13414	CpG island 13414	877 bp distal
Rr367466	regulatory region 367466	953 bp downstream
Rr580002	regulatory region 580002	414 bp distal
Rr580003	regulatory region 580003	1977 bp distal
Rr580004	regulatory region 580004	1933 bp distal
Rr580005	regulatory region 580005	1063 bp distal
Rr580006	regulatory region 580006	1428 bp proximal