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rs32932525 SNP Detail
Summary
  • ID
    rs32932525
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr3:89159303 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TTGTCCTTGG TGAGAACCGG
    ACACTGTCCT GTTCCCACTG CCCCCTGCCT CCACAGCTCT GCTCCCCAGG GCCTGGGGAA
    GGATGTTGGG AAACAAGAGA GAGGCAGAGA CCCATAGAGA CAGAGAAGCT GAGAGACACA
    GAGACAGAGG CACAAAGGAA AGGGTTCTGT GAGAAGGATA CACTGAAATC TATTGTGAAG
    K
    CACTGGGTGG TGGGCTCTGT GGGAACCTTG GTAGAATGGG AAGTTGGCAG CCCTGCCTTC
    TTTGGGGGAC TGCTGGAGTC TACAGTCCTT GACAGGTTAC AAATAGTGCT ACCTCCTAAG
    CAAACAATGC TCAGAGCCCT AAGGCAGACA GCCGGGGCAC TTAATTGTCC CCTATAGGTA
    CATTTCTTGG CTTCCCTTCC                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
ss46749257 NES10738865 PERLEGEN MM_PANEL2 f SNP G G G G G G T G G G T G G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
rs32932525 SNP G G G G G G T G G G T G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46749257 NES10738865 PERLEGEN MM_PANEL f SNP G/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:89159303 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi13414 CpG island 13414 324 bp distal
Rr367466 regulatory region 367466 400 bp downstream
Rr580001 regulatory region 580001 1722 bp distal
Rr580002 regulatory region 580002 within coordinates
Rr580003 regulatory region 580003 1424 bp distal
Rr580004 regulatory region 580004 1380 bp distal
Rr580005 regulatory region 580005 510 bp distal
Rr580006 regulatory region 580006 1981 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory