rs32927921 SNP Detail

Summary

• ID
  rs32927921
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:167381489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAC TTCCCAGTGA CTATGAAGAC
  K
  GCTCAGTGGT TAGAGCACTG GCTAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45213911	mCV23600485	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	T
ss148264070	ENSMUSSNP6589514	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32927921					SNP	G	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:167381489 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12746	CpG island 12746	323 bp distal
Gm75792	predicted gene, 75792	204 bp upstream
Rr397509	regulatory region 397509	1359 bp downstream
Rr570627	regulatory region 570627	1364 bp distal
Rr570628	regulatory region 570628	1587 bp distal
Rr570629	regulatory region 570629	within coordinates
Snai1	snail family zinc finger 1	Intron
Tssr21819	transcription start site region 21819	1359 bp downstream
Tssr21820	transcription start site region 21820	213 bp upstream