rs32927371 SNP Detail

Summary

• ID
  rs32927371
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:147894104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTCCTAGGA GGCCAGCACA GCAATTGCAG CTTAAAGAAG TTTTCAGGTT CCGCAAACAC
  TGAATTGTGA GAGGGGCGGC AGAAAATGCA CCCCTGCTCC ACGCCCCTGC CCAGCTCCTG
  CCCGTTCCCC AGTCCAACAG CTCCTCTGAC TTGGAAGGTG ACAGGACCAG CTGCTCAATG
  TCCTAGGAGG GGCAACTGCA GCTTAAGGGA GTTTTCAGGT TCCGCAAACA CTGAATTGTG
  AGAATGGCGG CAGAAAATGC ACCCCTGCTC CACACGCCTG CCCAGTTCCT GCCTGTTCCC
  Y
  AGTCCAACAG CTCCTCTGAC CTGGAAGGTG ACAGGACCAG CTGCTCAATG TCCTAGGAGG
  CCAGCACAAC AACTGCTGCT TAAGAAAGTT TTCAGGTTCC GCAAATACTA GGCGCTAGTC
  TCCCTCCATA ACTTCCTGAT CACGAGGCAG CTGAGATGCA AGAAGAAAGA TGAAACCGCG
  GAACTTCCCT TCATGCTGCC TAGCCCCGCC TTCTGGACCC GCCCAATATT CAGCAGCTTC
  CTGCAATTCT TCTAAGCCTA CCTACTTCGG GACCTTTTAA TTAATTAGCT TCCCAATTCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45714022	mCV24211636	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32927371					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147894104 () rs orientation: forward

Symbol	Name	Function Class
Gm20707	predicted gene 20707	within coordinates
Rr377386	regulatory region 377386	within coordinates
Rr398847	regulatory region 398847	1910 bp upstream
Rr604501	regulatory region 604501	835 bp distal
Rr604502	regulatory region 604502	within coordinates
Rr604503	regulatory region 604503	131 bp proximal
Tssr44548	transcription start site region 44548	155 bp downstream
Zfp984	zinc finger protein 984	Intron