rs32926574 SNP Detail

Summary

• ID
  rs32926574
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:43480219 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTCAAA AGGAGCTTTC
  TTATTTTTCT TTTTTTTTTT TTTTTTTTTT TTTTTCTTGT TAAAGAGCAA GGGTCTGGAG
  AGTTGGCTCA GTATTAAGAG CACTCGCTCT TGCAGAAGAC TCTGCTTGGA TCCCAGCACC
  CACAGAGTGG CTCACAACCA ACTATAACTC CTGTTCCAGG AGAAGCAACT CCCTCTTCTG
  R
  CCTTTATGGG ACTGCACATG CATACATGCA GGCAGGACAC CCATAAACAT AAAAATAAAG
  GTTAAATTGT TTAATAACTT TAGGGGCCTG TAAAGATGGC TCAGCAGTTA AGAGCACTGG
  GTTAATTCCT AGCATCCACA TGGTGGTTCA CAACCATCTG TAACTCTAGT CTCTTGGGAC
  CCAACATCCT CTTCTGACCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45713346	mCV23402677	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146240264	ENSMUSSNP5188207	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32926574					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:43480219 () rs orientation: forward

Symbol	Name	Function Class
Gm70652	predicted gene, 70652	1403 bp upstream
Rr367607	regulatory region 367607	1973 bp upstream
Rr398231	regulatory region 398231	1670 bp downstream
Rr590996	regulatory region 590996	1442 bp distal
Rr590997	regulatory region 590997	1829 bp distal
Rr590998	regulatory region 590998	1313 bp distal
Rr590999	regulatory region 590999	377 bp distal
Rr591000	regulatory region 591000	1142 bp distal
Rr591001	regulatory region 591001	531 bp distal
Rr591002	regulatory region 591002	within coordinates
Rr591003	regulatory region 591003	703 bp proximal
Sit1	suppression inducing transmembrane adaptor 1	1864 bp downstream
Tssr41421	transcription start site region 41421	1408 bp upstream