rs32924544 SNP Detail

Summary

• ID
  rs32924544
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88966577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGCCTTCTTC TGCCTCCTGA GTGCTGGGAT TAAAGGTGTA
  CACCACCTCA TCCGGCCGAA CTCAATCTTC TCTTAATTCA GTCAAGTTAT CTTAACTGCT
  Y
  AACTTCCTGC CCCTCATTCT ACCTGTCGAC AGAGATAAAG AATTATAGAG CAAATAACCT
  CTAGTCTTGA ACATATCAAT TTGAGTTTAT CATTTATAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46747718	NES10745904	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C		C	C	T		C
ss320836482	CHEV_3_88863192	CHEVERUD	SCREENING_POP	f	SNP											C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32924544					SNP	C	C	C	C	C	C	C	T	C	C	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46747718	NES10745904	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88966577 () rs orientation: forward

Symbol	Name	Function Class
Ash1l	ASH1 like histone lysine methyltransferase	Intron
Rr579938	regulatory region 579938	197 bp distal
Rr579939	regulatory region 579939	269 bp distal