rs32923875 SNP Detail

Summary

• ID
  rs32923875
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88965585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGCAGTAC ACACTCTTAA CTGCTGAGTG ACTGTTAAAG
  AAAAAACAGT GTATTTGCAA GGAGGGCTGA GGTGGGTCAG GCTCACTTTG AACTGCACAT
  R
  TACAGCTACT GCACTGTGTA GCATTTACAG AAACACAGTG TTTTCTGGAT TTTCTCTAGG
  GGGAGAGAAG CAACTATCTG CCCACTAATT CTACTTAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46747709	NES10745953	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	A	G	A	A		A	A	G	A		A
ss135473321	ENSMUSSNP5402904	ENSEMBL	ENSEMBL_Sanger	f	SNP		G					G
ss320836481	CHEV_3_88862200	CHEVERUD	SCREENING_POP	f	SNP										G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32923875					SNP	A	G	G	G	G	A	G	A	A	G	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46747709	NES10745953	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88965585 () rs orientation: forward

Symbol	Name	Function Class
Ash1l	ASH1 like histone lysine methyltransferase	Intron
Rr579938	regulatory region 579938	616 bp proximal
Rr579939	regulatory region 579939	702 bp proximal