rs32919057 SNP Detail

Summary

• ID
  rs32919057
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:157147248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTATTTTTA GAATTATTCA TGTTTTACCC TATTTAAGTA CTTTATTCAT TTGTGGGGCT
  GACTAAAAAA CACGTTGTTT ATTTATATTT GGTACTTGTA CTTAAACACT GTGTGTTTTT
  AAGATTTATT TTTATGTATG AGTGTCTTGC CTGCGTGTAT CTAAGTGCAC CAAGTGTGCC
  TAGTGCCCAC AGAGGCGAGA AGAGGGCATT GGATCCCCAG AAACTGGAGC TAGGGGTAGT
  TGGCTGGGCC ATGTGGGTGC TAGTAATCAA ACCCAGGTCC TCTGCTGAGC CACCTTGTCG
  Y
  CCCCCCCCCC CCCATCCCTC CACTTCCGTT TGCTTCTCTT TTAAATGTTT GACTTAGAAG
  AGTTCTTTAT AGATCTTTGG CTATAATTTC CTTGTCGGAT ACATGATTTA CAGAAATTTT
  CTCCACTCTT TAAGTGGTCT TCAGTTTTTC TTGATACTGT CTTTTTAAAC ACAAAAGATT
  TTAATTTATG TTTTCTTTTG TCACTTGTGA TTTAGATATT ATATAAGAAA CCATTTTCTA
  AACCAAAATC ATAGAGATGC TTTTTAATAA GAATTTTATA TTTTCAAAAG CTCTTAACCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45212554	mCV24816417	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32919057					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:157147248 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rpn2	ribophorin II			Intron
				Noncoding-Transcript-Variant
Rr568466	regulatory region 568466			1310 bp proximal