rs32917170 SNP Detail

Summary

• ID
  rs32917170
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88846855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCTTAAT TTTCAAAATC
  CCTTCCTCAG CATTTCAAGC ACCTGGATTT CATCAGGTAT GTGCCACCAC ATCTGCCACA
  TCTCGGGACG TCTCAGGAGT AAAGGTGCTT GTTATGTACT CTTGGTGAAC TGGGTCACCA
  TGAAGCCATG TGAAAGCTGA AGAAATAATT CCCACACCTG CACCCTCCAC ATGCTCATAC
  K
  CAGGAAGACA GTTTCTCTTT TCTTTCTTTT TTCCACAAAG GGTTTCTCTG TGTAGCCCTG
  GCTGTCCTGG AACTCACTCT GTAGACCAGG CTGGCCTCGA ACTCAGAAAT CTGCCTGCCT
  CTGCCTCCCA AGTGCTGGGA TTAAAGGCAT GTGCCACCAC GCCCGGCTAG GAATACATTT
  TTTTAAAGTA AGAAAACTAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46746860	NES10750009	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32917170					SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46746860	NES10750009	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88846855 () rs orientation: forward

Symbol	Name	Function Class
Dap3	death associated protein 3	Intron
Rr579925	regulatory region 579925	294 bp distal
Rr579926	regulatory region 579926	249 bp proximal
Rr579927	regulatory region 579927	319 bp proximal
Rr579928	regulatory region 579928	423 bp proximal