rs32917167 SNP Detail

Summary

• ID
  rs32917167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88846820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGCTGTC CTGGCACTTG
  TTATATAGAT CAGGCTGGCC TTAATTTTCA AAATCCCTTC CTCAGCATTT CAAGCACCTG
  GATTTCATCA GGTATGTGCC ACCACATCTG CCACATCTCG GGACGTCTCA GGAGTAAAGG
  TGCTTGTTAT GTACTCTTGG TGAACTGGGT CACCATGAAG CCATGTGAAA GCTGAAGAAA
  Y
  AATTCCCACA CCTGCACCCT CCACATGCTC ATACTCAGGA AGACAGTTTC TCTTTTCTTT
  CTTTTTTCCA CAAAGGGTTT CTCTGTGTAG CCCTGGCTGT CCTGGAACTC ACTCTGTAGA
  CCAGGCTGGC CTCGAACTCA GAAATCTGCC TGCCTCTGCC TCCCAAGTGC TGGGATTAAA
  GGCATGTGCC ACCACGCCCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46746857	NES10750008	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32917167					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46746857	NES10750008	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88846820 () rs orientation: forward

Symbol	Name	Function Class
Dap3	death associated protein 3	Intron
Rr579925	regulatory region 579925	259 bp distal
Rr579926	regulatory region 579926	284 bp proximal
Rr579927	regulatory region 579927	354 bp proximal
Rr579928	regulatory region 579928	458 bp proximal