rs32916419 SNP Detail

Summary

• ID
  rs32916419
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:88846438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACTACAG TTCAAAGTGC
  TCCAACACAC TCTTTTGGCC TGTGCAGGCA TCAGGAACAC ATGGAATATG CAGACACCCA
  GGAAGGCAAA ACCCCATACA GATTAAACAC AAAGCAAAAT ATAAGGAGGG AAGAAGGAAG
  CAAGTAGCCG CAGCCCCCAC CATATCCAAG GACCCCGCTG ATAGCTGAGG ATGGGCTTCC
  R
  TCTCTATCCA GCTCCTGCTC TCGCCAGCAA AGCCAGGATA CTAAACATAC CAAAGACAAA
  GGAAGAGCTG CTCTCAGGAC AGCACCTGAG TAATACACCC GAGTACCAGG AGAAGGCGCC
  AGCCCTTTCC ATCTACCATC GGCCGGCCTT GTTGTTCTGA GACAAGATCT CACCATTTAG
  CCCTGGCTGT CCTGGCACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46746848	NES10750046	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32916419					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46746848	NES10750046	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:88846438 () rs orientation: forward

Symbol	Name	Function Class
Dap3	death associated protein 3	Intron
Rr579925	regulatory region 579925	102 bp proximal
Rr579926	regulatory region 579926	666 bp proximal
Rr579927	regulatory region 579927	736 bp proximal
Rr579928	regulatory region 579928	840 bp proximal