rs32915183 SNP Detail

Summary

• ID
  rs32915183
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135000492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCGC AGGGACTCAT CGTCCCCTCC
  S
  GTTCCCGGGG CGGCGGCCTC CTCGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45711772	mCV25366098	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32915183					SNP	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135000492 () rs orientation: forward

Symbol	Name	Function Class
Clic4	chloride intracellular channel 4	421 bp upstream
Cpgi15068	CpG island 15068	within coordinates
Rr398589	regulatory region 398589	within coordinates
Rr601975	regulatory region 601975	378 bp distal
Rr601976	regulatory region 601976	1503 bp distal
Rr601977	regulatory region 601977	1457 bp distal
Rr601978	regulatory region 601978	711 bp distal
Rr601979	regulatory region 601979	368 bp distal
Rr601980	regulatory region 601980	within coordinates
Rr601981	regulatory region 601981	52 bp distal
Rr601982	regulatory region 601982	1363 bp proximal
Tssr39607	transcription start site region 39607	999 bp downstream
Tssr43973	transcription start site region 43973	464 bp upstream
Tssr43974	transcription start site region 43974	434 bp upstream
Tssr43975	transcription start site region 43975	408 bp upstream
Tssr43976	transcription start site region 43976	389 bp upstream
Tssr43977	transcription start site region 43977	362 bp upstream