rs32908324 SNP Detail

Summary

• ID
  rs32908324
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101468438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CCCTTGAAAC AAAGGTGGTT CAAACTTTCC ATAATGCTGT GATAAACTGT CCCCAGTGAC
  TCAAGTGCAA ACAGATTTAT TTCACCTCAC AATTCAAAAG CATCCATCAC AGCAAGACAG
  GGGCCCATGA ACTCGAAGTA ACAGGTCAGA AAGCAGAGAG CCATGAATGC TTGGGTAGCT
  CACTTTCTCC CGGTTCACCC AGGCAAGGAT CCCACACGAG GGAACAATGC CACTGACAGA
  GACCCATTGG TTAGCCCAAT GAAAGGATGC TCCCACAGGC ACGGCCAGAG GCCTGACTCT
  Y
  GGATGATGCT ATTTCTCCAG TTGACAACTG AGACTAAGTA TCACAGTCAC CAAGTTCATT
  TTTATGTCCT TCAAATAAGG GAGATAATGT TAAGTATGGG CAGTCAACAT AATTGATATG
  AGATGATATA GCACCAATAT AAATCACAAC GCCTGTTATT TTCAGATCTT AAACTTTTAT
  TCCAAATACT TAAACACAAA ATTGTGAAAT CAATCATAAT GCTAAAAAGT AAAATATGAA
  AATAAGTATT TGAACTCATG TTCTTCCATT TGAAAACATT TAACATGGAA ATATAGGTCC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45211152	mCV22318649	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147079073	ENSMUSSNP5211387	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss320429652	CHEV_2_101478250	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32908324					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101468438 () rs orientation: forward

Symbol	Name	Function Class
Rag1	recombination activating 1	189 bp downstream
Rr561526	regulatory region 561526	1518 bp proximal