rs32904162 SNP Detail

Summary

• ID
  rs32904162
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:109511967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTGGAAT TTCATCCTGG
  TTTTGGATTC CTGGATACTT GTTTACCTTG GTAGATAGTG TTTGCCTATC TTAAGTGAGC
  TATGATGGCA TTTGCTCCCA GCATATTTCT GCAGAAAATT AACAGTCATA ATTTTATTCC
  ATATGTATTA AATATTAATC AATTATGAGT CCCAAACTAT GTCAGAATTT GAAGATTCAG
  Y
  CATGAGCAAG ACTGAATGAT CCTTATCTTG CCAGAACCTA TAGGCTGGTG ACAAAATCTG
  ACCCCTTAAA GACATCTGGA TTTGTACTTT CTTCAAGAAA ACACAGTGAC TTGGGTTCAA
  AGACATAGTT CAAGCTTTAT CCTCAACTCA TTATCAATAA CTGAAACGTC AACTCAGTTT
  CTGTTTCCAT GCACATAGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45210816	mCV23782119	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147203271	ENSMUSSNP2822257	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32904162					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:109511967 () rs orientation: forward

Symbol	Name	Function Class
Bdnf	brain derived neurotrophic factor	Intron