rs32902004 SNP Detail

Summary

• ID
  rs32902004
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:71851148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCT CAGAATGCAT AGGGTCATTC
  Y
  TCCACCCAGT AGGATTCAGG TGTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46207561	mCV24425501	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss145146206	ENSMUSSNP1127310	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss322703841	CHEV_8_73922403	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32902004					SNP	T	T	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71851148 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
2310041K03Rik	RIKEN cDNA 2310041K03 gene			1729 bp upstream
Babam1	BRISC and BRCA1 A complex member 1			Intron
				Noncoding-Transcript-Variant
Rr400925	regulatory region 400925			1576 bp downstream
Rr665045	regulatory region 665045			1633 bp distal
Tssr77853	transcription start site region 77853			1613 bp downstream