rs32901315 SNP Detail

Summary

• ID
  rs32901315
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:32950456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACCTAACT GGTGGTTTCA
  CAACTCAGTC TCATGCCATC AAAGTGGTAA ACACACACAC ACACCTTACC ACCACGTGAA
  TTCTCTCAAT GCACTTCGGG GGAAACGTTC TTGGCCAGCT TCACAAAGTA CAACTCCTTT
  TGGATCAGCC ATAATGATCC CCCTTCTCTC CAGCTCCCCA AATCTACAGG AAGCGATACA
  Y
  TTCAATGCCC TAGGCAAGTA AGAGAATCCT GAGCCCGAAA GGCGGCGCAC AAGGCCCTAA
  GGCCCCGCGG GACCAGCCGT GCTCCAAACG ACCGTGGGAA CTGCCCTTGC CCTGGGCTGC
  GGAAGAGTTT GCAGGGCAAG CACTTCCCCA CACGCGCGAC GTCGAGAGCG CCCGGAGCCA
  GACGGCCACT AAGGAGCGCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45710242	mCV23410958	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss321072558	CHEV_4_33037431	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32901315					SNP	C	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:32950456 () rs orientation: forward

Symbol	Name	Function Class
Ankrd6	ankyrin repeat domain 6	Intron
Cpgi14106	CpG island 14106	within coordinates
Cpgi14107	CpG island 14107	1183 bp proximal
Rr590061	regulatory region 590061	1344 bp distal
Rr590062	regulatory region 590062	within coordinates
Rr590063	regulatory region 590063	31 bp proximal
Rr590064	regulatory region 590064	360 bp proximal
Rr590065	regulatory region 590065	474 bp proximal
Tssr41164	transcription start site region 41164	357 bp downstream