rs32900067 SNP Detail

Summary

• ID
  rs32900067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:186134111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCTTGCTTG CTGCAGTGTT
  TCTCACCTGC TCCCAGAGTC TGAGTTGTTG ATTCTGACTT CACCTCCAAA CCCCAAGGGC
  TGGTAGGGCT GGTCAGCAAG TAGTCCAGGG CACAGGCAGC ATCAGGGATT TTTAGTGGCA
  TCAGGGATTT TTAGTGGTAA TGGAATCAAT TTTTGACTTT GTTAAGGATA ACAAAAATTA
  Y
  AAAATGTTAG TTATGATTTT TCTTGTTAAA GAACTTGTAT TTCTCTCTCT CTCTCTCTCT
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTGT TGTATGATTG CATGTGTGTG TACACTTACA
  GGCATATGAA CATGCAGGCA TGCTTACCCA TGCATGCCTG AAGGAAATAC AGTAGTGGAT
  GTCAGGTTTC GAACATCTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46744861	NES10638626	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32900067					SNP	T	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46744861	NES10638626	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:186134111 () rs orientation: forward

Symbol	Name	Function Class
Rr425481	regulatory region 425481	1594 bp distal