rs32899605 SNP Detail

Summary

• ID
  rs32899605
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:75910532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAACTCACA AAACAAGCTC AAGGTTTGTT TTTCAAAAAA
  GAAGAAAAAT TTTGAACAGA ATCTGTCTGT TTGTTTTAAC TGCTTCTTGC TCTCAACTGG
  K
  TTTAAAAGTT ATAAAATTAA AGATGAATGC ATCTCCACCT CACTTTACTT CTTGGAGATG
  TTTACAAAGG CGACACATAT AAGGATTAGA AGCATAAGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45709865	mCV24421551	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss146575006	ENSMUSSNP2972042	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32899605					SNP	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:75910532 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ptprd	protein tyrosine phosphatase receptor type D			Intron
				Noncoding-Transcript-Variant
Rr594062	regulatory region 594062			126 bp distal