rs32897339 SNP Detail

Summary

• ID
  rs32897339
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101293609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGTTGTA AGGTTACAAG
  TATTAGAGTT GTTCTAAGTT AAAAGAATTA AATGGCTTAG GAAGGAAATT TAAACAGAAA
  GCTTGATGAA GAGGTTTGAT CTGGACCTCA GATGAAGTCT GAAATCGGGA CACTCATTCC
  ATGCGTGCTG TCCCACTGTC ATTTTCAGGG CAAGGAAATA TGGCTGAGTG TAGCTGTTCA
  K
  AGAAGAGAGA GCCACTTAGG GGCCGAATTA CCCAGTAGTG AACTACTAAA GACGAGCACC
  ATTGCTATAC ACCATTGCTC CGTTGGAAAA GGGGGAGGGG GTCATGTAAG CAAAGAATAC
  GTGCGAAGGG CAGGACATTT CAGAGCCATG TCTGGCATTT TCAGATGTCA TGAGCAGCTG
  AGGCTCTGAG CTTCACGGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45209241	mCV24390222	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
ss147073743	ENSMUSSNP1960840	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
ss320428361	CHEV_2_101303421	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32897339					SNP	T	G	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101293609 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	486 bp distal
Rr561501	regulatory region 561501	1213 bp proximal