rs32896379 SNP Detail

Summary

• ID
  rs32896379
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153079492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGTATCAGC GGGTTCATGC CCCAGAGAGC TTTGCTCATC
  ATAACATGAG CTACATCCTG TTCAGGAACC ATTCCTTTTG TTGAAGAAAC ATTGCAATGT
  W
  ATATGACAAA CATTTCCCCA TCACAAGTGG GGATTTGCCT AGAAAGATCT GCACAAGGGC
  AAGAAATCAC TGAAAACTAG ACTTACTTGA GCCTTTTAG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45209707	mCV23160523	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss147988378	ENSMUSSNP994486	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32896379					SNP	T	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153079492 () rs orientation: forward

Symbol	Name	Function Class
Plagl2	pleiomorphic adenoma gene-like 2	Intron
Rr567587	regulatory region 567587	890 bp proximal
Rr567588	regulatory region 567588	1384 bp proximal
Tssr26894	transcription start site region 26894	345 bp downstream