rs32895524 SNP Detail

Summary

• ID
  rs32895524
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:157149202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTACAAGT CTCCCTCCTA TTTTTACATT TTTGTTGTTT
  CTGTTTTTGC CTGTTTTGAA TTTTAAAAAC AGGAATTAAA TATACATATA GATGTGTGGG
  K
  TTTTTTTCAA AGTACAGGAA AATAATAATG AATATGAGTC TTTCTCCATG CTCTCAGTTC
  AGTCATCCTC AGAGAAGTCT ATCTATCATC AATAGCTTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45209303	mCV24816111	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss148096469	ENSMUSSNP3475520	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		G
ss320585487	CHEV_2_157133018	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32895524					SNP	T	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:157149202 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rpn2	ribophorin II			Intron
				Noncoding-Transcript-Variant
Rr568466	regulatory region 568466			102 bp distal
Rr568467	regulatory region 568467			638 bp proximal