rs32891087 SNP Detail

Summary

• ID
  rs32891087
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150649422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTTTTTC TTAAATATTG
  TTTATTTCTG TGTGTCACAA TGTTTGTGTT GGGACTTTGC ATGCCATAAG TCTCATTTAG
  AGGTCCGAGG ACAATTTGCA GGTCCTAGGG ATGGAAGTCC GGTTGTCAGG TTTAGATGCA
  AGCCCCTTTC CATGCTAAGC CACATTGCCA GTCCTCAAAA ATGCCCTTTT ATGTTATTGG
  K
  TTTTTGTTTG TTTTGTTTTT CAAGACAGGG TTTCTCTGTG TAACCTTGAG TGTCCTAGCA
  AAACGTCAAT TTTAAGGAGT TTTACATTAA GTCCTGACTG TAGGATGCCC AGAAGCATTT
  TACTGATGGC CAGAGTTTTC CCATTCAGTG AGTTTTTAAC TTCATGACTA AATATATTCT
  CTGGGTGAGG GCAACAGGGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45709026	mCV23182699	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G	G
ss148054940	ENSMUSSNP2759753	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32891087					SNP	G	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150649422 () rs orientation: forward

Symbol	Name	Function Class
Gm13091	predicted gene 13091	within coordinates
Rere	arginine glutamic acid dipeptide (RE) repeats	Intron
Rr398883	regulatory region 398883	1216 bp upstream
Rr605335	regulatory region 605335	812 bp proximal
Tssr40414	transcription start site region 40414	1455 bp downstream
Tssr40415	transcription start site region 40415	1490 bp upstream
Tssr40416	transcription start site region 40416	1593 bp upstream
Tssr44743	transcription start site region 44743	1899 bp downstream