rs32888400 SNP Detail

Summary

• ID
  rs32888400
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:9664422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTTCACCAT GTACAATATG TAAATCAGGT AAAATATTCT
  ATCTTCAAAT ATGATTTTTA TAATGCAATT TTTGAAAATA ATCTTATCTT GAAACACACT
  R
  TATATTACTA TCAACTCTAG ATGCCCTATT ATGCTAAATC ACACTAGACT ATCTTGGCCT
  TATCTAGCTA TGCATACAGT TTTTACTAAA TGGGATTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45708327	mCV23071498	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss145990557	ENSMUSSNP3265880	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32888400					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:9664422 () rs orientation: forward

Symbol	Name	Function Class
Asph	aspartate-beta-hydroxylase	Intron
Rr588727	regulatory region 588727	1961 bp distal
Rr588728	regulatory region 588728	613 bp distal
Rr588729	regulatory region 588729	364 bp proximal
Rr588730	regulatory region 588730	987 bp proximal
Rr588731	regulatory region 588731	1401 bp proximal