rs32888372 SNP Detail

Summary

• ID
  rs32888372
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164718616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACG CCAGTTTATT CCCAGCAAGC
  W
  AAAGACTACA TGCAACTAGG GCAGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45208328	mCV23132290	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss148232683	ENSMUSSNP1782924	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320607032	CHEV_2_164702196	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32888372					SNP	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164718616 () rs orientation: forward

Symbol	Name	Function Class
4930445K14Rik	RIKEN cDNA 4930445K14 gene	1591 bp downstream
Rr569746	regulatory region 569746	1731 bp distal
Rr569747	regulatory region 569747	837 bp distal
Rr569748	regulatory region 569748	1197 bp proximal
Rr569749	regulatory region 569749	1902 bp proximal
Rr569750	regulatory region 569750	1967 bp proximal