rs32888325 SNP Detail

Summary

• ID
  rs32888325
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:59852592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG TGTGTACTAA GAGTGTGTCT
  S
  TATTGCATTC AGAGGGATCA AGGGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45708142	mCV24717390	ABI	CRAMUS_MOUSE	f	SNP	G	C	G
ss146403672	ENSMUSSNP3533930	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321141568	CHEV_4_59865464	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32888325					SNP	G	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59852592 () rs orientation: forward

Symbol	Name	Function Class
Rr376573	regulatory region 376573	1419 bp downstream
Rr593160	regulatory region 593160	1897 bp distal
Rr593162	regulatory region 593162	942 bp distal
Snx30	sorting nexin family member 30	Intron