rs32884044 SNP Detail

Summary

• ID
  rs32884044
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:70320664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGAAGGCT GGCCTTGCAG
  GCTCGGCTCA CTGCTGCATT GCTGTTTGGG GGACTGAGAG CAATGTGAAC AGATTCGGGC
  TCCCTCTGGC TGCCTCTCTG AGAACAGACA CCAAGGAGTT CAGGAGAGGA ACAATGGGAA
  CAGCGAGGAC AACTGGGATA AGCTAAGCCA GAGCCTGGTG TTTGCCAGGA TGGGAAGAGT
  R
  CAGATGGGTG AGAACCTGTT TGTTTCTGTA TACTTGAGTA GAGGCCAACA GGAGTAAGAA
  TAGTGAATAC ATACATATAA TGCTCAGAGG AGAGAGCATG CTAAGTAACC AGGGAGAGAC
  AAACAAGGTG GTACGCTTTG AGCTGAGGTC TCAACACAGC AGGCAGCTGC AGGCAGAAAA
  GAGAACAGAA GGCCCTAGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45707812	mCV24157692	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss146495781	ENSMUSSNP1440007	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32884044					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:70320664 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cdk5rap2	CDK5 regulatory subunit associated protein 2			Intron
				Noncoding-Transcript-Variant
Rr593870	regulatory region 593870			within coordinates
Rr593871	regulatory region 593871			104 bp distal