rs32883826 SNP Detail

Summary

• ID
  rs32883826
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:154032350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCAGTTGGA CAGGTGGGGT GGAAGTCAGG GAGACTTGAG
  AAGAATAAAT GAGGAGGCCT GAGGGAGGAG CTGAGCAGCA GAGGTAGAAA GAAGAGGTAG
  M
  CAGAGACACC ACTTGTGACA GGACAGAGAC AAGATGAAGA ATGACCGGAA GTTGGATCTA
  CTCTGCAAAG AAACAAAACC GTCTCTGTCG GGAGCAGCA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45207723	mCV23868176	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss148023887	ENSMUSSNP6745684	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss320569687	CHEV_2_154016166	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32883826					SNP	A	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154032350 () rs orientation: forward

Symbol	Name	Function Class
Bpifb1	BPI fold containing family B, member 1	388 bp upstream
Rr567774	regulatory region 567774	within coordinates
Rr567775	regulatory region 567775	399 bp proximal
Rr567776	regulatory region 567776	625 bp proximal
Rr567777	regulatory region 567777	1760 bp proximal
Tssr20971	transcription start site region 20971	319 bp upstream
Tssr20972	transcription start site region 20972	333 bp upstream
Tssr20973	transcription start site region 20973	346 bp upstream
Tssr20974	transcription start site region 20974	376 bp upstream
Tssr20975	transcription start site region 20975	403 bp upstream
Tssr20976	transcription start site region 20976	838 bp upstream