rs32881342 SNP Detail

Summary

• ID
  rs32881342
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:100321607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGTCTGC CTTTCCTAGG
  TGGGCAATTT AATGAGAGAG AACTATGAAA GCTAAGAGGC TGGTTCCACC TGCTTTTCCT
  GATCCCTAGC CAACCTCTAG GCTTCTGCCA AGACCTAGCT CCCTGCCTAC AACCACCCAT
  AGGTCCCATT CAATACCCAG ATTTCCTATA TTCTCCTCCA GGGTCTAGCC TGGTGAGTAC
  M
  CCATTCCGTT CAATTCTCAC TTTTCCACAA TCCATTAGAT TTATCCTGGG TCCCATAACC
  AGTGCAACAG CTTAATCTGG CCTCCCCTGC CTTCATTGCA GGGGAACACT AGGCTTAGTC
  AGGATCTTCC CTGACTATCT GCCAAACCAC AGGGCTGTCA GTCTATCTAC CCTCACACAC
  CCCATCTAAG GTAAAACAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss45707712	mCV24687262	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss321227255	CHEV_4_100137015	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs32881342					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100321607 () rs orientation: forward

Symbol	Name	Function Class
Gm18288	predicted gene, 18288	1465 bp upstream
Gm69466	predicted gene, 69466	within coordinates
Rr595994	regulatory region 595994	1382 bp distal