rs32881338 SNP Detail

Summary

• ID
  rs32881338
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149299793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGATCTCT TGAATTGCTT
  CCAGGTGTGT TTTCAATACA TAATCAATAC AAAAGCTAGT GCAAAAAGCA TGGCAGAGCA
  GCTGACAAAG ACCAAATCAC TCTACAAAAA GCTGCCCCAC TGGAAGAAGA GTGACGAGTA
  AAGTGAAGGC TCGCGTGCTG TGGGCACCGC CCAGGACAGG GGAGCCCACT GAAGAGCTTA
  Y
  TCTTCAGAAG TGAAGATGCG CCAAGAGATC TGGCGCACAC ACAACAGAAA CCAGGAGGTG
  AGGGCAGGGA AGTGTGAGTG AAGTGGTTAC TAGCACTAAA ATGGACTTTA CATCCCAGCA
  CTATGAGTCT TGTTTGACTT AAAGGACTAT TAAAGGTGAG AACCAGCCAC GAAGGCAGAA
  AGCCTGTGTG GCCAGATGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45707704	mCV23443582	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148029630	ENSMUSSNP4303779	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32881338					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149299793 () rs orientation: forward

Symbol	Name	Function Class
Kif1b	kinesin family member 1B	Intron
Rr604862	regulatory region 604862	within coordinates
Rr604863	regulatory region 604863	735 bp proximal
Tssr44639	transcription start site region 44639	1140 bp upstream