rs32880338 SNP Detail

Summary

• ID
  rs32880338
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:76885976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTG GATATGTGAA CTTCCCTACT
  S
  TCTCAATCAC AAGCTCTTTA AAAGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45206882	mCV23805885	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss146777414	ENSMUSSNP296685	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss320356922	CHEV_2_76893689	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32880338					SNP	C	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76885976 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccdc141	coiled-coil domain containing 141			Intron
				Noncoding-Transcript-Variant
Gm75155	predicted gene, 75155			1293 bp upstream
Rr559739	regulatory region 559739			716 bp proximal