rs32876713 SNP Detail

Summary

• ID
  rs32876713
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148242665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCT CAGATTCATG ATCCTCATGC
  M
  CCAGTCTCCT GAGTGGTAGG ATTAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45706648	mCV24710877	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss321417733	CHEV_4_147532317	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32876713					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148242665 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi15295	CpG island 15295			1339 bp proximal
Fbxo44	F-box protein 44			Intron
				Noncoding-Transcript-Variant
Rr398857	regulatory region 398857			1820 bp upstream
Rr604608	regulatory region 604608			1377 bp proximal
Tssr40263	transcription start site region 40263			1939 bp upstream
Tssr44596	transcription start site region 44596			1363 bp downstream
Tssr44597	transcription start site region 44597			1600 bp downstream
Tssr44598	transcription start site region 44598			1612 bp downstream
Tssr44599	transcription start site region 44599			1630 bp downstream
Tssr44600	transcription start site region 44600			1823 bp downstream